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24, chemin de Borde Rouge –Auzeville – CS52627
31326 Castanet Tolosan CEDEX - France

Dernière mise à jour : Mai 2018




Centre Alpin sur les Réseaux Trophiques et Ecosystèmes Lacustre

RIMET Frédéric

Frédéric Rimet
Design Engineer


Tél. : +33 (0)4 50 26 78 74
Fax : +33 (0)4 50 26 07 60
Mail : frederic.rimet[at]

Plateau technique

Laboratoire de biodiversité et de biologie moléculaire

Thématique(s) de recherche

Phycologie, bioindication, taxonomie, phylogénie, écologie, écotoxicologie, paléolimnologie

Parcours professionnel

Du 1-12-2004 au 31-10-2007 : Diren Lorraine (Metz), titulaire du poste d’hydrobiologiste
Du 1-3-2000 au 11-2004 : Centre de Recherche Public – Gabriel Lippmann (Luxembourg), Chercheur en algologie (diatomées)
Du 1-10-1999 au 31-12-1999 : Diren Rhône-Alpes (Lyon), Hydrobiologiste (diatomées)

Formation initiale et formation(s) caractéristique(s)

2012 - Thèse « Diatoms: an ecoregional indicator of nutrients, organic matter and micropollutants pollution »D

DESS « Eaux continentales pollutions et aménagements » (Besançon)

Enseignement(s) dispensé(s)

Master Ecomont USMB, Stage professionnel phytoplancton, Stage professionnels métabarcoding diatomées

Thèses co-encadrées

Tapolczai K., 12/2018. Time for change: Towards the implementation of new approaches in diatom-based ecological quality assessment for rivers. University of Grenoble Alpes. Co-supervisor and Jury member with A. Bouchez

Vasselon V., 12/2018. Barcoding et bioindication : développement du metabarcoding des diatomées pour l'évaluation de la qualité des cours d'eau. University of Grenoble Alpes. Jury member

Berthon V., 12/2014. Changement climatique et perturbations locales dans trois grands lacs alpins au cours du dernier siècle : ce qu’enseignent les diatomées et les rotifers. University of Grenoble Alpes. Co-supervisor and jury member with JM Dorioz and M Perga.

Publication(s) récente(s)

Chaumeil, Philippe; Fischer-Le Saux, Marion; Frigerio, Jean-Marc; Grenier, Eric; Rimet, Frédéric; Streito, Jean-Claude; Laval, Valérie; Franc, Alain, 2018, "R-Syst: a network providing curated molecular databases and data analysis tools for taxonomy and systematics (Prokaryotes and Eucaryotes)",, Portail Data Inra, V1

Rimet, Frederic; Gusev, Evgenuy; Kahlert, Maria; Kelly, Martyn; Kulikovskiy, Maxim; Maltsev, Yevhen; Mann, David; Pfannkuchen, Martin; Trobajo, Rosa; Vasselon, Valentin; Zimmermann, Jonas; Bouchez, Agnès, 2018, "Diatom-rbcl, an open-access barcode library for diatoms",, Portail Data Inra, V1

Rimet, Frédéric; Chardon, Cécile; Lainé, Leslie; Bouchez, Agnès; Domaizon, Isabelle; Guillard, Jean; Jacquet, Stéphan, 2018, "Thonon Culture Collection -TCC- a freshwater microalgae collection",, Portail Data Inra, V1

Rimet Frédéric, & Druart Jean-Claude. (2018). A trait database for Phytoplankton of temperate lakes: numerical file [Data set]. Zenodo.

Rivera, Sinziana; Vasselon, Valentin; Chardon, Cécile; Guéguen, Julie; Bouchez, Agnès; Rimet, Frédéric, 2018, "Bioindication diatomées : comparaison microscopie / barcoding ADN. Données brutes Fastq 2016 + 2017, Test des différentes stratégies bioinfo sur données 2016. Projet AFB numéro 15000239 / A30.",, Portail Data Inra, V1, UNF:6:ajEMExtsrc4xeT8GdJzfgQ==

Rivera, Sinziana; Vasselon, Valentin; Chardon, Cécile; Jacas, Louis; Guéguen, Julie; Bouchez, Agnès; Rimet, Frederic, 2018, "Bioindication diatomées : comparaison microscopie / barcoding ADN. Listes floristiques, indices IBD. Projet AFB numéro 15000239 / A30.",, Portail Data Inra, V1

Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnès, 2018, "Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)",, Portail Data Inra, V1

Rimet, Frédéric; Berthon, Vincent; Bouchez, Agnès (2016): Diatom community samples. figshare.

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