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INRA
24, chemin de Borde Rouge –Auzeville – CS52627
31326 Castanet Tolosan CEDEX - France

Dernière mise à jour : Mai 2018

Menu Logo Principal CARRTEL INRAE CARRTEL INRAE USMB logo CARRTEL INRAE CARNOT logo

CARRTEL INRAE USMB

UMR CARRTEL

Centre Alpin sur les Réseaux Trophiques et Ecosystèmes Lacustre

RIMET Frédéric

Frédéric Rimet
Design Engineer

 

Tél. : +33 (0)4 50 26 78 74
Fax : +33 (0)4 50 26 07 60
Mail : frederic.rimet[at]inrae.fr

Plateau technique

Laboratoire de biodiversité et de biologie moléculaire

Thématique(s) de recherche

Phycologie, bioindication, taxonomie, phylogénie, écologie, écotoxicologie, paléolimnologie

Parcours professionnel

Du 1-12-2004 au 31-10-2007 : Diren Lorraine (Metz), titulaire du poste d’hydrobiologiste
Du 1-3-2000 au 11-2004 : Centre de Recherche Public – Gabriel Lippmann (Luxembourg), Chercheur en algologie (diatomées)
Du 1-10-1999 au 31-12-1999 : Diren Rhône-Alpes (Lyon), Hydrobiologiste (diatomées)

Formation initiale et formation(s) caractéristique(s)

2012 - Thèse « Diatoms: an ecoregional indicator of nutrients, organic matter and micropollutants pollution »D

DESS « Eaux continentales pollutions et aménagements » (Besançon)

Enseignement(s) dispensé(s)

Master Ecomont USMB, Stage professionnel phytoplancton, Stage professionnels métabarcoding diatomées

Thèses co-encadrées

Tapolczai K., 12/2018. Time for change: Towards the implementation of new approaches in diatom-based ecological quality assessment for rivers. University of Grenoble Alpes. Co-supervisor and Jury member with A. Bouchez

Vasselon V., 12/2018. Barcoding et bioindication : développement du metabarcoding des diatomées pour l'évaluation de la qualité des cours d'eau. University of Grenoble Alpes. Jury member

Berthon V., 12/2014. Changement climatique et perturbations locales dans trois grands lacs alpins au cours du dernier siècle : ce qu’enseignent les diatomées et les rotifers. University of Grenoble Alpes. Co-supervisor and jury member with JM Dorioz and M Perga.

Publication(s) récente(s)

Chaumeil, Philippe; Fischer-Le Saux, Marion; Frigerio, Jean-Marc; Grenier, Eric; Rimet, Frédéric; Streito, Jean-Claude; Laval, Valérie; Franc, Alain, 2018, "R-Syst: a network providing curated molecular databases and data analysis tools for taxonomy and systematics (Prokaryotes and Eucaryotes)", https://doi.org/10.15454/OEDAUS, Portail Data Inra, V1

Rimet, Frederic; Gusev, Evgenuy; Kahlert, Maria; Kelly, Martyn; Kulikovskiy, Maxim; Maltsev, Yevhen; Mann, David; Pfannkuchen, Martin; Trobajo, Rosa; Vasselon, Valentin; Zimmermann, Jonas; Bouchez, Agnès, 2018, "Diatom-rbcl, an open-access barcode library for diatoms", https://doi.org/10.15454/TOMBYZ, Portail Data Inra, V1

Rimet, Frédéric; Chardon, Cécile; Lainé, Leslie; Bouchez, Agnès; Domaizon, Isabelle; Guillard, Jean; Jacquet, Stéphan, 2018, "Thonon Culture Collection -TCC- a freshwater microalgae collection", https://doi.org/10.15454/UQEMVW, Portail Data Inra, V1

Rimet Frédéric, & Druart Jean-Claude. (2018). A trait database for Phytoplankton of temperate lakes: numerical file [Data set]. Zenodo. http://doi.org/10.5281/zenodo.1164834

Rivera, Sinziana; Vasselon, Valentin; Chardon, Cécile; Guéguen, Julie; Bouchez, Agnès; Rimet, Frédéric, 2018, "Bioindication diatomées : comparaison microscopie / barcoding ADN. Données brutes Fastq 2016 + 2017, Test des différentes stratégies bioinfo sur données 2016. Projet AFB numéro 15000239 / A30.", https://doi.org/10.15454/9EG5Z4, Portail Data Inra, V1, UNF:6:ajEMExtsrc4xeT8GdJzfgQ==

Rivera, Sinziana; Vasselon, Valentin; Chardon, Cécile; Jacas, Louis; Guéguen, Julie; Bouchez, Agnès; Rimet, Frederic, 2018, "Bioindication diatomées : comparaison microscopie / barcoding ADN. Listes floristiques, indices IBD. Projet AFB numéro 15000239 / A30.", https://doi.org/10.15454/WNI6FQ, Portail Data Inra, V1

Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnès, 2018, "Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)", https://doi.org/10.15454/HYRVUH, Portail Data Inra, V1

Rimet, Frédéric; Berthon, Vincent; Bouchez, Agnès (2016): Diatom community samples. figshare. https://dx.doi.org/10.6084/m9.figshare.2068590.v2

Page web personnelle

http://www.researcherid.com/rid/S-2702-2018